MetaPath

MetaPath: Metabolic pathway visualisation and analysis (MetaPath)

MetaPath is a tool for the analysis of metabolic pathway and associated visualisation of experimental data. Built on the MetaCyc database it provides an interactive map in which multiple pathways can be simultaneously visualised. Multiple annotations from the MetaCyc database are available including synonyms, associated reactions and pathways and database unification links. Metabolomics change data can be imported via simple CSV formats for visualisation on targeted pathways. Pathways can be mined and removed algorithmically to identify key regulated pathways within in a given dataset providing a simper route to metabolic function.   

 

 

Category

Desktop application

 

Scientific areas

Algorithms and Methods

Metabolomics

Biochemistry

Life sciences

 

Main features

network analysis

pathway explore

visualization

 

License

GNU General Public License version 3.0 (GPL-3.0)

 

Supported Operating Systems

Mac OS X

Linux

Windows

 

Supported CPU Architectures

All (architecture independent)

 

Programming languages

Python

 

Build tools

 

Test tools