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REMS

Resource Entitlement Management System (REMS)

REMS (Resource Entitlement Management System) is a tool for managing access rights to resources, most importantly scientific datasets. A researcher can fill in a data access application which REMS then circulates to the dataser owner (or his/her representative(s)) for review and approval. REMS provides also necessary reporting functionality and the integrations to the dataset catalogue (for dataset metadata import to REMS) and the Policy Enforcement Point (for enforcing the access rights granted on REMS).

REMS has been originally developed for the ELIXIR research infrast

Davix

Davix

Davix is a lightweight toolkit for file access and file management with HTTP Based protocols.
Davix aims to be an easy-to-use, reliable and performant I/O layer for Cloud and Grid Storages.

emgr

Empirical Gramian Framework (emgr)

Empirical gramians can be computed for linear and nonlinear control systems for purposes of model order reduction, uncertainty quantification or system identification.

MetaPath

MetaPath: Metabolic pathway visualisation and analysis (MetaPath)

MetaPath is a tool for the analysis of metabolic pathway and associated visualisation of experimental data. Built on the MetaCyc database it provides an interactive map in which multiple pathways can be simultaneously visualised. Multiple annotations from the MetaCyc database are available including synonyms, associated reactions and pathways and database unification links. Metabolomics change data can be imported via simple CSV formats for visualisation on targeted pathways. Pathways can be mined and removed algorithmically to identify key re

GridWay

GridWay Metscheduler (GridWay)

The GridWay Metascheduler enables large-scale, reliable and efficient sharing of computing resources: clusters, supercomputers, stand-alone servers… It supports different LRMS types within a single organization or scattered across several administrative domains. GridWay provides a single point of access to all resources in an organization, from in-house systems to Grid infrastructures and Cloud providers. GridWay supports most of existing Grid middlewares, can be used on main production Grid infrastructures and can access to Cloud resources.

EMI

The European Middleware Initiative Software Distribution (EMI)

The European Middleware Initiative (EMI) distribution is a software platform for high performance distributed computing. It is at the core of grid middleware distributions used by scientific research communities and distributed computing infrastructures all over the world including WLCG, the Worldwide LHC Computing Grid, which supports, for example, the search for the Higgs boson and new types of matter searches of the physicists at LHC, together with other large scientific challenges in astronomy,

gLExec

gLExec

gLExec is a program that acts as a light-weight 'gatekeeper'. it takes Grid credentials as input, and takes the local site policy into account to authenticate and authorize the credentials. It will then switch to a new execution sandbox and execute the given command as the switched identity. gLExec is also capable of functioning as a light-weight control point which offers a binary yes/no result in logging-only mode.

Dynamic federations: storage aggregation using open tools and protocols

Dynamic federations: the Uniform Generic Redirector (UGR) (Dynamic federations: storage aggregation using open tools and protocols)

The Unifor Generic Redirector (UGR) is the core of the Storage federation system that we designed and built to match with the existing and upcoming Grid-related data management architectures. The system is able to federate storage sites and metadata endpoints that expose a suitable data access protocol, into a transparent, high performance storage federation that exposes a unique name space. The architecture can accommodate LFN/PFN algorithmic name translations without the need of catalogues. On the other hand,

GVSS2

Grid Virtual Screening Services (GVSS2)

GVSS is developed for large-scale drug screening. It vastly reduces the cost and time of screening by the distributed computing infrastructure. From data preparation, docking simulation, results analysis to visualization, all the services in the virtual screening process are supported by the GVSS web portal. Both Audock version 3 and version 4 are supported by GVSS2 now. GVSS also provides around 700 proteins from Protein Data Bank and about 10 million drug compounds from the ZINC database as the default data source.   

GStat2

Grid Status Monitoring Tool (GStat2)

GStat is the Grid Status monitoring tool which collects data from the Grid Information System (BDII) and does sanity checks. The primary goals of GStat2 is to verify site published information on BDII and to display information about Grid services, resource information and related metrics in various views, such as Geo view, LDAP browser, site view, VO view, Summary view etc. GStat2 is now one of the most popular operation tool in most Grid sites. GStat2 is the result of collaboration between Academia Sinica Grid Computing Centre (ASGC) and CERN.

openModeller

openModeller

openModeller is a multi-platform C++ framework for ecological niche modelling. It supports different raster formats for environmental data, different formats for species occurrence data and it contains several modelling algorithms. Besides the C++ framework itself, there are command-line tools, a graphical user interface, a web service interface and an API for Python.

GOCDB

GOCDB Grid Information Registry (GOCDB)

A repository for recording and querying for Grid topology information including NGIs, Sites, Services, URLs, Users/Contacts, Service Downtimes. Records what sites/services/downtimes are meant to be functioning at a particular snapshot in time. Provides a Web portal interface and REST style API for querying data in XML Key component of European Grid Infrastructure.

SAM

Service Availability Monitoring (SAM)

SAM is a grid monitoring and reporting system for large-scale production grids.

It builds on top of open-source components such as 

StoRM

Storage Resource Manager (StoRM)

StoRM is a

  •     light
  •     scalable
  •     flexible
  •     high-performance
  •     file system independent
storage manager service (SRM) for generic disk based storage system, compliant with the standard SRM interface version 2.2. StoRM provides data management capabilities in a Grid environment to share, access and transfer data among heterogeneous and geographically distributed data centres.In particular, StoRM works on each

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